May be unrelated, but I've noticed that my bee nests/farm have been mucked up from this date:

• Some bees get pulled into adjacent locations (separated by air and logs), leaving too many bees in one 'farm' and none in another.
• If I accidentally anger the bees, I will occasionally get stung even with /god on, so I have to keep breeding the bees to replace the ones that dies from the sting.

Have any other bee farmers noticed this?

 

If you mean donkeys, I believe they're disabled due to being very susceptible to duping.

 

Horses are still ridable though

Screen capture - e86319745c892334ab84d50640739581 - Gyazo